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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846620.1_cds_XP_016509733.1_22640
CDS Infomation

[gene=LOC107827164] [db_xref=GeneID:107827164] [protein=hypersensitive-induced response protein 1-like] [protein_id=XP_016509733.1] [location=complement(join(959..1332,2058..2154,2238..2329,2521..2641,3521..3709))] [gbkey=CDS]
Sequence

ATGGGGAATCTGCTTTGCTGTGTACAAGTGGACCAATCCACAGTGGCTATAAAGGAGAGA
TTTGGCAAGTTTAATGATGTGCTTGAGCCTGGATGTCATTTCTTGCCATGGTGTATAGGG
AGTCAGATTGCTGGATACCTAACTTTAAGGTTGCAGCAGCTTGATGTGCGATGCGAGACA
AAGTCAAAGGATAATGTATTTGTAACTGTTGTTGCTTCAATTCAATATCGTGCTCTGGCT
GATAAAGCTACTGATGCTTTTTACAAGCTTAGTAATACTGGATCCCAGATCCAAGCCTAT
GTGTTTGATGTTATCAGAGCGAGCGTTCCAAAGCTAAATTTGGATGATGTCTTTGAGCAG
AAGAATCAAATTGCTAAAGCAGTGGAGGATGAACTTGAAAAGGCAATGTCTGCTTACGGA
TATGAGATTGTTCAGACACTCATAGTTGATATAGAGCCAGATGAACATGTCAAGCGAGCT
ATGAATGAAATCAATGCAGCTGCAAGAATGAGAGTAGCTGCCAATGAGAAAGCAGAAGCT
GAAAAAATTGTCCAGATTAAACGAGCTGAGGGTGATGCTGAGGCTAAGTACCTGGCGGGG
CTTGGGGTTGCTAGACAACGCCAGGCCATTGTAGATGGTTTAAGGGACAGTGTTCTTGGC
TTCTCAAGTAATGTCCCAGGTACAAGTGCCAAGGACGTCTTGGACATGGTCCTCATCACT
CAATATTTTGACACCATGAAGGAAATTGGCGCCACATCTAAATCCTCAGCAGTCTTTATC
CCACACGGACCTGGTGCTGTTAGTGACATTGCAGGGCAGATTCGACATGGATTGCTCCAG
GGTTTAGCTGTCGAGCAAAAAAATCTTTTATAA

Peptide Sequence

PEP ID

XP_016509733.1
PEP Infomation

PREDICTED: hypersensitive-induced response protein 1-like [Nicotiana tabacum]
Sequence

MGNLLCCVQVDQSTVAIKERFGKFNDVLEPGCHFLPWCIGSQIAGYLTLRLQQLDVRCET
KSKDNVFVTVVASIQYRALADKATDAFYKLSNTGSQIQAYVFDVIRASVPKLNLDDVFEQ
KNQIAKAVEDELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARMRVAANEKAEA
EKIVQIKRAEGDAEAKYLAGLGVARQRQAIVDGLRDSVLGFSSNVPGTSAKDVLDMVLIT
QYFDTMKEIGATSKSSAVFIPHGPGAVSDIAGQIRHGLLQGLAVEQKNLL

Transcript Sequence

Gene sequence data has not been registered.